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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6010472 chr22:49157038 A/T CCDC117 chr22:29168662-29185289:+ 0.55 6.63 9.09E-11 Box Plot
THCA rs6010472 chr22:49157038 A/T CCDC134 chr22:42196683-42222303:+ 0.62 6.25 9.37E-10 Box Plot
THCA rs6010472 chr22:49157038 A/T CCDC157 chr22:30752624-30774647:+ 0.51 6.98 1.02E-11 Box Plot
THCA rs6010472 chr22:49157038 A/T CHKB-CPT1B chr22:51007298-51021394:- 0.31 5.94 5.59E-9 Box Plot
THCA rs6010472 chr22:49157038 A/T CRKL chr22:21271714-21308037:+ 0.67 7.73 6.58E-14 Box Plot
THCA rs6010472 chr22:49157038 A/T CSNK1E chr22:38686697-38714089:- 0.42 5.9 6.9E-9 Box Plot
THCA rs6010472 chr22:49157038 A/T CYTSA chr22:24666786-24813707:+ 0.54 7.94 1.47E-14 Box Plot
THCA rs6010472 chr22:49157038 A/T DDT chr22:24313554-24322660:- 0.44 6.38 4.23E-10 Box Plot
THCA rs6010472 chr22:49157038 A/T DDX17 chr22:38879445-38903665:- 0.44 6.13 1.88E-9 Box Plot
THCA rs6010472 chr22:49157038 A/T DEPDC5 chr22:32149937-32303020:+ 0.54 5.89 7.24E-9 Box Plot
THCA rs6010472 chr22:49157038 A/T DGCR14 chr22:19117792-19132197:- 0.59 7.73 6.31E-14 Box Plot
THCA rs6010472 chr22:49157038 A/T DGCR2 chr22:19023795-19109967:- 0.58 6.05 2.85E-9 Box Plot
THCA rs6010472 chr22:49157038 A/T DGCR6L chr22:20301799-20307603:- 0.45 6.27 7.97E-10 Box Plot
THCA rs6010472 chr22:49157038 A/T DNAL4 chr22:39174513-39190203:- 0.62 7.34 9.52E-13 Box Plot
THCA rs6010472 chr22:49157038 A/T DRG1 chr22:31795509-31926620:+ 0.69 8.56 1.61E-16 Box Plot